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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
271
gene expression
240
accessible chromatin
197
target gene predictions
167
candidate regulatory elements
98
differential activity
95
chromatin state
91
binding sites
55
histone modifications
45
variant allelic effects
20
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
289
February, 2021
260
September, 2022
155
September, 2023
128
November, 2021
108
February, 2024
51
March, 2023
46
May, 2021
40
June, 2020
33
August, 2021
25
October, 2022
22
January, 2021
20
May, 2020
18
January, 2020
15
November, 2022
14
March, 2020
12
February, 2023
11
February, 2020
8
August, 2017
7
April, 2020
7
August, 2018
6
October, 2019
4
January, 2022
3
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
804
bed bed3+
351
tsv
188
bigWig
86
bed bed9
78
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1290
Homo sapiens
Biosample type
844
primary cell
249
cell line
171
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
976
AMP
155
KPMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
907
hg19
316
GRCh38
BIOSAMPLE
TYPE
1290 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 154 more…
cell line
K562
1
23
7
7
2
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
1
2
1
GM19240
1
2
1
1
2
1
+ See 37 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
endocrine pancreas
4
7
4
+ See 22 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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