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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
280
gene expression
240
accessible chromatin
226
target gene predictions
181
candidate regulatory elements
98
chromatin state
98
differential activity
59
binding sites
45
variant allelic effects
42
histone modifications
18
eQTL
5
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
272
February, 2021
272
September, 2022
155
September, 2023
131
February, 2024
130
November, 2021
51
March, 2023
49
May, 2021
39
August, 2021
38
June, 2020
22
January, 2021
20
May, 2020
18
January, 2020
15
March, 2020
15
November, 2022
12
February, 2023
11
February, 2020
7
April, 2020
7
August, 2017
7
August, 2018
7
October, 2022
6
October, 2019
4
January, 2022
2
March, 2024
2
May, 2022
2
November, 2019
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
801
bed bed3+
360
tsv
190
bigWig
90
bed bed9
78
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1298
Homo sapiens
Biosample type
857
primary cell
203
tissue
181
cell line
56
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
982
AMP
155
KPMP
130
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
906
hg19
345
GRCh38
BIOSAMPLE
TYPE
1298 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 156 more…
tissue
islet of Langerhans
11
6
1
3
2
1
1
13
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
chorionic villus
4
8
4
+ See 26 more…
cell line
H1-hESC
8
1
39
1
1
2
1
EndoC_BH1
8
8
1
3
1
H9
8
7
1
H7-hESC
1
2
1
1
1
HUES6
1
1
2
1
1
+ See 28 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
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