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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
213
accessible chromatin
161
gene expression
127
target gene predictions
108
candidate regulatory elements
57
chromatin state
43
binding sites
41
variant allelic effects
30
differential activity
28
histone modifications
4
eQTL
2
caQTL
Date released
200
February, 2021
163
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
561
bed bed3+
176
bigWig
170
tsv
78
txt
54
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
814
Homo sapiens
Biosample type
664
primary cell
81
tissue
43
cell line
26
in vitro differentiated cells
Organ
794
epithelium
512
kidney
466
brain
443
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
255
heart
244
limb
231
vasculature
218
bodily fluid
215
embryo
207
blood
204
skin of body
184
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
658
AMP
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
618
hg19
239
GRCh38
award.project!
KPMP
BIOSAMPLE
TYPE
814 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
differential activity
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
9
7
2
2
1
1
2
hepatocyte
8
13
3
1
1
1
2
4
epithelial cell of proximal tubule
1
16
1
2
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 115 more…
tissue
pigmented layer of retina
20
thyroid gland
1
5
8
4
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
+ See 17 more…
cell line
EndoC_BH1
8
8
1
1
3
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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