Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
261
gene expression
223
accessible chromatin
143
target gene predictions
130
candidate regulatory elements
93
differential activity
75
chromatin state
47
binding sites
47
variant allelic effects
31
histone modifications
10
eQTL
9
Fine-mapped variants
5
caQTL
Date released
219
February, 2021
199
September, 2022
155
September, 2023
127
November, 2021
77
February, 2024
38
March, 2023
37
May, 2021
28
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
4
January, 2022
4
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
May, 2019
Available data
625
bed bed3+
344
tsv
185
bigWig
78
txt
72
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1074
Homo sapiens
Biosample type
836
primary cell
165
tissue
47
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
763
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
709
hg19
283
GRCh38
BIOSAMPLE
TYPE
1074 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 150 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
thyroid gland
1
5
8
4
1
tibial artery
1
3
2
3
3
2
2
3
ascending aorta
1
1
2
4
3
1
1
3
+ See 26 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
Download