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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
268
gene expression
238
accessible chromatin
196
target gene predictions
171
candidate regulatory elements
99
chromatin state
97
differential activity
94
binding sites
56
histone modifications
52
variant allelic effects
11
eQTL
9
Fine-mapped variants
5
caQTL
1
pQTL
Date released
292
February, 2021
265
September, 2022
165
September, 2023
127
November, 2021
107
February, 2024
40
May, 2021
39
June, 2020
38
March, 2023
27
August, 2021
27
October, 2022
25
January, 2020
25
May, 2020
20
January, 2021
17
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
7
April, 2020
7
October, 2019
6
August, 2018
5
August, 2017
4
November, 2019
3
January, 2022
3
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
814
bed bed3+
355
tsv
189
bigWig
94
bed bed9
80
txt
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1297
Homo sapiens
Biosample type
871
primary cell
252
cell line
148
tissue
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
976
AMP
165
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
922
hg19
336
GRCh38
BIOSAMPLE
TYPE
1297 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 158 more…
cell line
K562
1
23
7
7
2
1
EndoC_BH1
8
8
1
3
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
1
2
1
GM19240
1
2
1
1
2
1
+ See 38 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
2
3
ascending aorta
1
1
2
4
3
1
1
3
aorta
1
4
4
4
+ See 26 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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