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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
245
gene expression
126
target gene predictions
109
candidate regulatory elements
92
differential activity
57
chromatin state
53
accessible chromatin
43
binding sites
37
variant allelic effects
28
histone modifications
6
eQTL
2
caQTL
Date released
198
February, 2021
160
September, 2022
155
September, 2023
51
November, 2021
43
February, 2024
38
March, 2023
34
May, 2021
26
June, 2020
15
August, 2021
14
May, 2020
10
January, 2021
9
February, 2020
8
November, 2022
7
March, 2020
6
August, 2018
6
October, 2022
5
February, 2023
3
August, 2017
3
January, 2022
3
March, 2024
2
January, 2020
1
July, 2020
1
May, 2022
Available data
566
bed bed3+
325
tsv
bigWig
78
txt
54
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
798
Homo sapiens
Biosample type
670
primary cell
63
tissue
41
cell line
24
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
403
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
580
AMP
155
KPMP
51
ENCODE
10
T1D
2
community
Genome assembly (visualization)
454
hg19
124
GRCh38
files.file_type!
bigWig
BIOSAMPLE
TYPE
798 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
hepatocyte
8
3
1
1
1
1
2
4
glomerular endothelial cell
14
1
2
1
1
1
endothelial cell of umbilical vein
4
6
5
1
2
1
+ See 134 more…
tissue
breast epithelium
3
5
2
1
esophagus muscularis mucosa
2
5
2
1
1
esophagus squamous epithelium
2
6
2
1
esophagus
3
4
2
1
pigmented layer of retina
7
+ See 12 more…
cell line
EndoC_BH1
8
1
3
7
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
1
2
1
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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