Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
205
gene expression
181
candidate regulatory elements
88
target gene predictions
86
chromatin state
56
accessible chromatin
56
differential activity
18
variant allelic effects
9
binding sites
8
eQTL
8
histone modifications
Date released
252
September, 2022
205
February, 2021
140
September, 2023
28
August, 2021
19
June, 2020
19
May, 2020
14
January, 2020
9
February, 2020
7
November, 2021
5
January, 2022
5
March, 2024
4
March, 2020
3
February, 2024
2
October, 2022
1
April, 2019
1
May, 2019
1
May, 2021
Available data
356
bed bed3+
254
tsv
87
txt
86
bed bed9
38
bigWig
2
bigBed bed9
Organism
715
Homo sapiens
Biosample type
349
tissue
324
primary cell
41
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
568
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
443
hg19
122
GRCh38
BIOSAMPLE
TYPE
715 results
search-icon
table-tab-icon
Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
eQTL
histone modifications
tissue
kidney
7
29
14
16
10
1
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 24 more…
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
glomerular visceral epithelial cell
5
2
1
1
2
kidney tubule cell
1
3
2
2
2
kidney glomerular epithelial cell
1
2
1
1
2
1
+ See 66 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 7 more…
in vitro differentiated cells
renal cell carcinoma
1
See all biosamples
Download