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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
119
target gene predictions
116
candidate regulatory elements
59
chromatin state
22
accessible chromatin
16
binding sites
15
histone modifications
12
gene expression
4
eQTL
2
variant allelic effects
Date released
174
September, 2022
87
February, 2021
53
February, 2024
17
June, 2020
8
August, 2021
8
May, 2021
7
November, 2021
4
January, 2022
2
March, 2020
2
March, 2024
2
October, 2022
1
August, 2017
Available data
291
bed bed3+
58
bed bed9
12
tsv
5
bigWig
Organism
365
Homo sapiens
Biosample type
152
tissue
130
cell line
52
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
358
AMP
7
ENCODE
Genome assembly (visualization)
349
hg19
120
GRCh38
BIOSAMPLE
TYPE
365 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
placenta
15
26
14
1
1
2
1
chorionic villus
4
8
4
esophagus muscularis mucosa
2
5
2
1
1
esophagus squamous epithelium
2
6
2
1
trophoblast
3
4
2
1
1
+ See 12 more…
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
HUES8
4
1
1
+ See 15 more…
primary cell
trophoblast cell
5
7
4
1
1
fibroblast of villous mesenchyme
1
2
1
1
2
1
epithelial cell of esophagus
1
2
1
2
smooth muscle cell of the esophagus
2
2
amnion mesenchymal stem cell
1
1
1
+ See 8 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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