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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
169
candidate regulatory elements
107
target gene predictions
100
chromatin state
61
accessible chromatin
53
histone modifications
42
Fine-mapped variants
37
eQTL
29
gene expression
26
variant allelic effects
22
binding sites
2
caQTL
2
differential activity
Date released
261
September, 2022
153
February, 2021
45
March, 2020
36
January, 2020
27
June, 2020
27
May, 2020
24
January, 2022
22
February, 2020
13
May, 2021
8
September, 2023
7
October, 2022
6
August, 2017
5
May, 2019
4
November, 2021
3
February, 2023
3
February, 2024
3
March, 2024
3
November, 2019
Available data
439
bed bed3+
94
bed bed9
85
tsv
35
bigWig
8
bigBed bed9
Organism
649
Homo sapiens
Biosample type
490
tissue
81
cell line
74
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
641
AMP
5
KPMP
4
ENCODE
Genome assembly (visualization)
587
hg19
210
GRCh38
BIOSAMPLE
TYPE
650 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
caQTL
differential activity
tissue
brain
29
16
18
2
3
2
1
1
1
renal pelvis
19
9
9
2
1
caudate nucleus
5
3
4
2
1
3
2
1
1
coronary artery
3
3
3
3
3
2
1
2
1
tibial artery
3
2
3
3
3
2
1
2
+ See 69 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 10 more…
primary cell
fibroblast of pulmonary artery
2
1
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
pulmonary artery endothelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 12 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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