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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
112
target gene predictions
53
histone modifications
51
accessible chromatin
19
binding sites
10
variant allelic effects
6
chromatin state
Date released
186
September, 2022
142
February, 2021
27
June, 2020
18
January, 2020
14
May, 2021
12
May, 2020
7
October, 2022
6
August, 2017
3
November, 2021
3
September, 2023
2
March, 2020
1
January, 2022
Available data
421
bed bed3+
99
bed bed9
67
tsv
24
bigWig
6
bigBed bed9
Organism
421
Homo sapiens
Biosample type
282
tissue
68
cell line
63
primary cell
7
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
418
AMP
3
ENCODE
Genome assembly (visualization)
421
hg19
24
GRCh38
BIOSAMPLE
TYPE
421 results
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candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
tissue
brain
29
16
3
2
1
1
placenta
26
15
2
1
1
caudate nucleus
5
3
1
2
1
chorionic villus
8
4
layer of hippocampus
6
3
1
1
1
+ See 57 more…
cell line
pituitary stalk
10
SK-N-DZ
4
2
1
1
SK-N-SH
4
3
1
SK-N-MC
2
1
1
1
2
BE(2)-C
1
1
1
1
2
+ See 10 more…
primary cell
trophoblast cell
7
5
1
1
fibroblast of villous mesenchyme
2
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
cardiac fibroblast
3
2
astrocyte of the cerebellum
2
1
1
1
+ See 14 more…
in vitro differentiated cells
trophoblast cell
2
2
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
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