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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
170
candidate regulatory elements
112
target gene predictions
105
chromatin state
53
histone modifications
51
accessible chromatin
36
Fine-mapped variants
30
eQTL
19
binding sites
19
gene expression
17
variant allelic effects
Date released
279
September, 2022
143
February, 2021
38
March, 2020
29
January, 2020
27
June, 2020
19
January, 2022
19
May, 2020
18
February, 2020
14
May, 2021
7
October, 2022
6
August, 2017
4
May, 2019
3
November, 2021
3
September, 2023
1
February, 2024
1
March, 2024
1
November, 2019
Available data
421
bed bed3+
99
bed bed9
67
tsv
24
bigWig
6
bigBed bed9
Organism
611
Homo sapiens
Biosample type
447
tissue
80
cell line
75
primary cell
9
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
nose
1
pericardium
Project
609
AMP
3
ENCODE
Genome assembly (visualization)
568
hg19
189
GRCh38
organ_slims!
breast
nose
BIOSAMPLE
TYPE
612 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
16
18
3
2
2
1
1
1
placenta
26
15
14
2
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
+ See 62 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 10 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
+ See 14 more…
in vitro differentiated cells
trophoblast cell
2
2
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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