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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
220
accessible chromatin
157
candidate regulatory elements
157
target gene predictions
85
chromatin state
46
binding sites
41
variant allelic effects
33
histone modifications
19
gene expression
4
eQTL
2
caQTL
2
differential activity
Date released
247
September, 2022
143
February, 2021
129
November, 2021
61
February, 2024
31
June, 2020
20
January, 2021
20
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
August, 2021
11
February, 2023
9
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
January, 2022
1
November, 2019
Available data
655
bed bed3+
tsv
178
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
766
Homo sapiens
Biosample type
549
primary cell
157
tissue
37
cell line
23
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
608
AMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
740
hg19
260
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
766 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
1
3
1
1
2
4
4
endothelial cell of umbilical vein
2
6
4
5
2
1
foreskin keratinocyte
11
4
4
trophoblast cell
1
7
5
4
1
+ See 101 more…
tissue
placenta
1
26
15
14
1
2
1
pigmented layer of retina
20
chorionic villus
8
4
4
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 19 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
+ See 1 more…
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