Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
candidate regulatory elements
57
target gene predictions
50
chromatin state
33
accessible chromatin
24
gene expression
19
histone modifications
16
binding sites
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
caQTL
Date released
145
September, 2022
59
February, 2021
29
February, 2024
11
June, 2020
10
March, 2020
8
November, 2021
6
May, 2021
4
August, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
2
October, 2022
1
February, 2020
1
July, 2020
1
May, 2022
1
November, 2019
1
September, 2018
Available data
212
bed bed3+
47
bed bed9
27
tsv
26
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
292
Homo sapiens
Biosample type
146
tissue
103
primary cell
31
cell line
12
in vitro differentiated cells
Organ
944
epithelium
648
kidney
437
brain
437
connective tissue
366
musculature of body
310
lung
286
intestine
262
pancreas
257
vasculature
247
heart
239
limb
216
bodily fluid
215
embryo
205
blood
201
skin of body
195
blood vessel
172
large intestine
147
liver
145
extraembryonic component
118
stomach
108
eye
89
bone element
87
mammary gland
83
small intestine
82
uterus
77
prostate gland
76
adipose tissue
72
adrenal gland
72
placenta
68
artery
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
nerve
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
284
AMP
8
ENCODE
Genome assembly (visualization)
262
hg19
94
GRCh38
1
hg18
annotation_type!
eQTL
caQTL
BIOSAMPLE
TYPE
292 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
differential activity
variant allelic effects
Fine-mapped variants
tissue
placenta
26
15
14
1
2
1
liver
13
10
9
4
1
2
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
right lobe of liver
2
1
1
1
3
+ See 3 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of villous mesenchyme
2
1
1
1
1
2
+ See 10 more…
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
trophoblast cell
2
2
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download