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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
candidate regulatory elements
76
target gene predictions
65
chromatin state
40
accessible chromatin
28
binding sites
24
gene expression
24
histone modifications
9
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
187
September, 2022
87
February, 2021
30
February, 2024
15
June, 2020
14
November, 2021
10
August, 2021
10
March, 2020
8
May, 2021
5
October, 2022
4
August, 2017
4
March, 2023
3
January, 2020
3
May, 2020
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
286
bed bed3+
61
bed bed9
29
bigWig
28
tsv
3
csv
1
bam
1
bigBed bed9
Organism
389
Homo sapiens
Biosample type
158
tissue
149
primary cell
67
cell line
15
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
375
AMP
14
ENCODE
Genome assembly (visualization)
356
hg19
117
GRCh38
2
hg18
BIOSAMPLE
TYPE
389 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
placenta
26
15
14
1
1
2
1
liver
13
10
9
4
1
1
2
7
1
1
chorionic villus
8
4
4
chorion membrane
3
3
3
1
right lobe of liver
2
1
1
1
1
3
+ See 4 more…
primary cell
hepatocyte
1
3
1
8
1
13
4
2
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
6
6
4
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
+ See 15 more…
cell line
MCF-7
9
6
5
1
3
2
HepG2
2
3
2
2
3
5
T47D
3
2
2
HuH-7
1
1
1
1
1
1
HTR-8/Svneo
1
1
1
+ See 3 more…
in vitro differentiated cells
trophoblast cell
2
2
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
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