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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
246
gene expression
213
accessible chromatin
162
candidate regulatory elements
160
target gene predictions
92
differential activity
88
chromatin state
43
binding sites
41
variant allelic effects
32
histone modifications
4
eQTL
2
caQTL
Date released
256
September, 2022
226
February, 2021
155
September, 2023
129
November, 2021
71
February, 2024
38
March, 2023
34
May, 2021
30
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
14
January, 2020
12
February, 2023
9
February, 2020
9
November, 2022
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
652
bed bed3+
317
tsv
176
bigWig
85
bed bed9
78
txt
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1083
Homo sapiens
Biosample type
854
primary cell
177
tissue
52
cell line
in vitro differentiated cells
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
770
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
740
hg19
273
GRCh38
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1083 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 153 more…
tissue
placenta
1
26
15
14
1
2
1
pigmented layer of retina
20
chorionic villus
8
4
4
Peyer's patch
1
7
3
3
breast epithelium
1
5
3
2
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
GM18507
1
1
2
1
1
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 8 more…
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