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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
50
chromatin state
48
gene expression
33
differential activity
16
eQTL
11
histone modifications
11
variant allelic effects
8
binding sites
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
143
September, 2022
64
February, 2021
45
March, 2023
36
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
10
June, 2020
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
271
bed bed3+
73
tsv
60
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
418
Homo sapiens
Biosample type
207
tissue
166
primary cell
37
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
375
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
328
hg19
95
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
418 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
variant allelic effects
binding sites
sQTL
variant to gene
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
3
11
13
1
1
2
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
8
5
4
2
1
1
chorionic villus
8
4
4
+ See 12 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
trophoblast cell
7
5
1
4
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
pancreatic ductal cell
3
See all biosamples
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