Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
16
candidate regulatory elements
16
target gene predictions
11
accessible chromatin
10
chromatin state
2
binding sites
2
histone modifications
2
variant allelic effects
Date released
30
September, 2022
12
November, 2021
9
February, 2021
3
June, 2020
2
February, 2024
2
May, 2021
1
October, 2022
Available data
49
bed bed3+
10
bed bed9
8
bigWig
Organism
59
Homo sapiens
Biosample type
tissue
51
primary cell
5
in vitro differentiated cells
3
cell line
Organ
888
epithelium
363
connective tissue
351
kidney
214
bodily fluid
204
blood
182
vasculature
180
embryo
179
skin of body
163
pancreas
130
lung
120
blood vessel
117
brain
98
liver
85
mammary gland
70
uterus
69
musculature of body
67
bone element
63
prostate gland
62
lymph node
62
penis
57
intestine
48
extraembryonic component
41
heart
40
large intestine
39
eye
33
artery
22
vein
21
lymphatic vessel
16
bronchus
13
bone marrow
13
placenta
11
adrenal gland
11
gonad
11
stomach
10
esophagus
10
pituitary gland
8
limb
8
mouth
8
testis
7
spinal cord
6
lymphoid tissue
5
adipose tissue
5
trachea
4
nose
4
small intestine
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
47
AMP
12
ENCODE
Genome assembly (visualization)
59
hg19
22
GRCh38
biosample_type!
tissue
BIOSAMPLE
TYPE
59 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
variant allelic effects
primary cell
trophoblast cell
7
5
1
4
1
fibroblast of villous mesenchyme
2
1
1
1
2
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
epithelial cell of amnion
1
1
1
+ See 10 more…
in vitro differentiated cells
trophoblast cell
2
2
1
cell line
HTR-8/Svneo
1
1
1
See all biosamples
Download