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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
124
accessible chromatin
53
target gene predictions
49
gene expression
candidate regulatory elements
33
differential activity
26
chromatin state
16
eQTL
13
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
49
September, 2022
47
March, 2023
33
May, 2021
28
February, 2021
26
February, 2024
25
February, 2023
22
November, 2021
22
November, 2022
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
4
February, 2020
4
January, 2022
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
Available data
215
bed bed3+
93
bigWig
78
tsv
22
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
344
Homo sapiens
Biosample type
154
tissue
143
primary cell
38
cell line
9
in vitro differentiated cells
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
300
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
251
hg19
77
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
344 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
retina
23
3
1
3
1
1
1
1
pigmented layer of retina
20
pancreas
5
5
3
1
1
1
1
body of pancreas
5
2
4
1
1
3
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
1
1
2
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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