Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
target gene predictions
75
candidate regulatory elements
65
accessible chromatin
37
chromatin state
19
binding sites
15
histone modifications
11
gene expression
2
variant allelic effects
1
eQTL
Date released
108
September, 2022
70
February, 2021
52
February, 2024
24
February, 2023
22
November, 2022
16
June, 2020
8
August, 2021
7
May, 2021
3
October, 2022
2
February, 2020
2
January, 2020
2
May, 2020
1
August, 2017
1
March, 2020
Available data
270
bed bed3+
36
bed bed9
32
bigWig
12
tsv
Organism
318
Homo sapiens
Biosample type
137
cell line
105
tissue
39
primary cell
36
in vitro differentiated cells
1
stem cell
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
318
AMP
6
ENCODE
Genome assembly (visualization)
306
hg19
90
GRCh38
BIOSAMPLE
TYPE
318 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
gene expression
variant allelic effects
eQTL
cell line
H1-hESC
39
1
1
1
2
1
8
H9
8
7
1
WERI-Rb-1
1
2
1
1
2
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 17 more…
tissue
retina
3
6
23
3
1
1
1
1
1
pigmented layer of retina
20
chorionic villus
4
8
4
trophoblast
3
4
1
2
1
eye
2
4
1
2
+ See 5 more…
primary cell
trophoblast cell
5
7
1
4
1
retinal pigment epithelial cell
1
2
2
1
2
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
1
2
1
primordial germ cell
1
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 4 more…
stem cell
H1-hESC
1
See all biosamples
Download