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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
accessible chromatin
89
candidate regulatory elements
74
target gene predictions
48
chromatin state
48
gene expression
34
binding sites
25
histone modifications
20
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
132
September, 2022
114
February, 2021
54
November, 2021
25
February, 2023
22
June, 2020
18
February, 2024
17
November, 2022
15
September, 2023
14
October, 2022
11
August, 2021
11
February, 2020
11
January, 2020
10
May, 2020
10
May, 2021
8
March, 2020
7
March, 2023
6
January, 2022
3
April, 2020
3
August, 2017
3
May, 2022
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
October, 2019
Available data
374
bed bed3+
87
bigWig
63
tsv
45
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
506
Homo sapiens
Biosample type
300
primary cell
165
tissue
in vitro differentiated cells
40
cell line
1
stem cell
Organ
923
epithelium
651
kidney
462
brain
408
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
428
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
435
hg19
133
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
506 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 48 more…
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 10 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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