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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
gene expression
56
differential activity
30
accessible chromatin
22
candidate regulatory elements
12
chromatin state
12
target gene predictions
7
variant allelic effects
3
binding sites
1
histone modifications
Date released
140
September, 2023
98
February, 2021
36
September, 2022
20
August, 2021
8
January, 2020
7
February, 2020
7
June, 2020
7
May, 2020
7
November, 2021
2
October, 2022
Available data
238
tsv
87
txt
72
bed bed3+
23
bigWig
12
bed bed9
Organism
332
Homo sapiens
Biosample type
371
tissue
332
primary cell
51
cell line
7
in vitro differentiated cells
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
185
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
84
hg19
27
GRCh38
BIOSAMPLE
TYPE
332 results
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Clear Filters
gene expression
differential activity
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
variant allelic effects
binding sites
histone modifications
primary cell
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
glomerular visceral epithelial cell
5
2
2
1
1
kidney tubule cell
1
2
3
2
2
retinal pigment epithelial cell
3
2
1
1
2
1
kidney glomerular epithelial cell
1
2
2
1
1
1
renal cortical epithelial cell
1
2
2
1
1
1
kidney epithelial cell
1
1
2
1
1
1
kidney interstitial cell
6
1
kidney loop of Henle thin ascending limb epithelial cell
7
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
3
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
3
2
Afferent / Efferent Arteriole Endothelial Cell
3
2
Connecting Tubule Cell
3
2
Cortical Thick Ascending Limb Cell
3
2
Degenerative Connecting Tubule Cell
3
2
Degenerative Connecting Tubule Cell / Principal Cell
3
2
Degenerative Cortical Thick Ascending Limb Cell
3
2
Degenerative Distal Convoluted Tubule Cell
3
2
Degenerative Intercalated Cell Type A
3
2
Degenerative Peritubular Capillary Endothelial Cell
3
2
Degenerative Principal Cell
3
2
Degenerative Proximal Tubule Epithelial Cell
3
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
3
2
Descending Thin Limb Cell Type 1
3
2
Distal Convoluted Tubule Cell Type 1
3
2
Glomerular Capillary Endothelial Cell
3
2
Intercalated Cell Type A
3
2
Intercalated Cell Type B
3
2
Medullary Thick Ascending Limb Cell
3
2
Parietal Epithelial Cell
3
2
Peritubular Capillary Endothelial Cell
3
2
Podocyte
3
2
Principal Cell
3
2
Proximal Tubule Epithelial Cell Segment 1 and 2
3
2
Proximal Tubule Epithelial Cell Segment 3
3
2
Renin-positive Juxtaglomerular Granular Cell
3
2
iris pigment epithelial cell
1
2
1
1
kidney capillary endothelial cell
1
1
1
1
1
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
4
1
kidney loop of Henle thick ascending limb epithelial cell
5
fibroblast of the conjunctiva
2
1
1
kidney connecting tubule epithelial cell
4
S-shaped body
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
Muller cell
2
kidney inner medulla collecting duct intercalated cell
2
renal principal cell
1
1
ureteric bud
1
1
retinal pigment epithelial cell
1
epithelial cell of distal tubule
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
metanephros
1
parietal epithelial cell
1
proximal tubule
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal intercalated cell
1
retinal bipolar neuron
1
See all biosamples
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