Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
accessible chromatin
58
candidate regulatory elements
34
chromatin state
32
target gene predictions
29
gene expression
21
binding sites
16
differential activity
13
variant allelic effects
7
histone modifications
3
Fine-mapped variants
2
eQTL
1
caQTL
Date released
81
September, 2022
51
February, 2021
30
September, 2023
25
February, 2023
22
November, 2022
18
February, 2024
14
January, 2020
12
May, 2020
10
November, 2021
9
June, 2020
6
March, 2020
5
October, 2022
4
March, 2023
3
April, 2020
3
February, 2020
2
October, 2019
1
August, 2017
1
August, 2021
1
March, 2024
1
May, 2021
1
November, 2019
Available data
215
bed bed3+
58
bigWig
50
tsv
33
bed bed9
6
bigBed bed9
2
txt
Organism
300
Homo sapiens
Biosample type
163
primary cell
112
tissue
17
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
257
AMP
30
KPMP
10
ENCODE
3
LungMap
Genome assembly (visualization)
251
hg19
75
GRCh38
organ_slims!
artery
ureter
BIOSAMPLE
TYPE
300 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
chromatin state
target gene predictions
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell of umbilical vein
2
6
5
4
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
3
2
1
1
2
1
choroid plexus epithelial cell
1
2
1
1
1
1
+ See 27 more…
tissue
retina
23
6
3
3
1
1
1
1
1
pigmented layer of retina
20
ascending aorta
1
4
3
2
1
1
3
1
aorta
4
4
4
1
thoracic aorta
1
4
3
2
1
+ See 4 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
vein endothelial cell
1
1
fibroblast of the conjunctiva
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download