Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
71
accessible chromatin
64
candidate regulatory elements
37
target gene predictions
32
chromatin state
16
binding sites
15
eQTL
15
gene expression
12
histone modifications
6
Fine-mapped variants
6
variant allelic effects
2
differential activity
Date released
90
September, 2022
69
February, 2021
24
February, 2023
23
November, 2022
12
June, 2020
8
March, 2020
7
February, 2020
6
August, 2021
6
January, 2020
5
May, 2020
5
May, 2021
4
February, 2024
4
January, 2022
4
November, 2021
2
August, 2017
2
October, 2022
2
September, 2018
1
January, 2018
1
March, 2024
Available data
210
bed bed3+
41
bigWig
30
bed bed9
25
tsv
1
bigBed bed9
Organism
276
Homo sapiens
Biosample type
169
tissue
66
cell line
34
primary cell
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
272
AMP
4
ENCODE
Genome assembly (visualization)
252
hg19
53
GRCh38
2
hg18
BIOSAMPLE
TYPE
276 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
1
4
3
1
subcutaneous adipose tissue
2
2
1
6
5
3
1
1
pigmented layer of retina
20
omental fat pad
2
5
2
2
2
2
3
+ See 9 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
1
2
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
RWPE1
1
2
1
1
1
1
+ See 10 more…
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
epithelial cell of prostate
4
3
2
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
white adipose cell
1
See all biosamples
Download