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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
82
accessible chromatin
75
candidate regulatory elements
74
target gene predictions
58
binding sites
44
chromatin state
34
histone modifications
10
gene expression
8
eQTL
6
Fine-mapped variants
6
variant allelic effects
2
caQTL
2
differential activity
1
pQTL
Date released
123
September, 2022
106
February, 2021
29
February, 2024
27
February, 2023
22
November, 2022
22
October, 2022
21
June, 2020
7
May, 2020
6
February, 2020
6
January, 2020
6
March, 2020
6
May, 2021
5
September, 2023
4
November, 2021
3
August, 2021
3
January, 2022
2
August, 2017
2
November, 2019
1
March, 2024
1
May, 2019
Available data
334
bed bed3+
45
bigWig
42
bed bed9
19
tsv
2
bigBed bed9
Organism
402
Homo sapiens
Biosample type
219
cell line
116
tissue
61
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
393
AMP
5
KPMP
4
ENCODE
Genome assembly (visualization)
384
hg19
97
GRCh38
BIOSAMPLE
TYPE
402 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
gene expression
eQTL
Fine-mapped variants
variant allelic effects
caQTL
differential activity
pQTL
cell line
K562
1
7
23
2
7
1
GM12878
1
2
8
2
2
1
GM06990
1
2
1
2
1
1
GM19240
1
1
2
2
1
1
HAP-1
1
2
2
1
1
1
+ See 30 more…
tissue
retina
23
6
3
1
3
1
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
tibial artery
3
3
2
3
1
2
3
2
eye
1
4
2
2
+ See 6 more…
primary cell
retinal pigment epithelial cell
3
2
1
2
1
1
fibroblast of pulmonary artery
1
2
1
2
1
1
pulmonary artery endothelial cell
1
2
1
1
1
1
peripheral blood mononuclear cell
4
1
1
Afferent / Efferent Arteriole Endothelial Cell
3
2
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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