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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
104
candidate regulatory elements
97
accessible chromatin
91
target gene predictions
68
binding sites
64
chromatin state
35
histone modifications
26
gene expression
12
differential activity
11
variant allelic effects
9
Fine-mapped variants
9
eQTL
3
caQTL
1
pQTL
Date released
162
September, 2022
127
February, 2021
44
February, 2024
28
February, 2023
23
October, 2022
22
June, 2020
22
November, 2022
20
September, 2023
13
January, 2020
13
May, 2020
12
March, 2020
7
February, 2020
7
May, 2021
7
November, 2021
4
August, 2021
4
March, 2023
3
August, 2017
3
January, 2022
3
November, 2019
2
April, 2020
2
October, 2019
1
March, 2024
1
May, 2019
Available data
411
bed bed3+
61
bed bed9
59
bigWig
49
tsv
8
bigBed bed9
Organism
530
Homo sapiens
Biosample type
221
cell line
157
tissue
146
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
501
AMP
20
KPMP
7
ENCODE
2
LungMap
Genome assembly (visualization)
483
hg19
143
GRCh38
BIOSAMPLE
TYPE
530 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
histone modifications
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
1
23
2
7
1
GM12878
2
1
8
2
2
1
GM06990
2
1
1
2
1
1
GM19240
1
1
2
2
1
1
HAP-1
2
1
2
1
1
1
+ See 31 more…
tissue
retina
6
23
3
1
3
1
1
1
1
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
tibial artery
3
3
2
3
1
2
3
2
ascending aorta
4
1
2
3
1
1
3
1
+ See 10 more…
primary cell
endothelial cell of umbilical vein
6
2
4
2
5
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
retinal pigment epithelial cell
2
3
1
2
1
1
fibroblast of pulmonary artery
2
1
1
2
1
1
+ See 23 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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