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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
129
candidate regulatory elements
101
accessible chromatin
85
target gene predictions
81
chromatin state
52
histone modifications
36
Fine-mapped variants
30
eQTL
22
binding sites
20
gene expression
19
variant allelic effects
Date released
207
September, 2022
127
February, 2021
38
March, 2020
31
January, 2020
27
June, 2020
24
February, 2023
22
November, 2022
21
May, 2020
20
February, 2020
18
January, 2022
11
May, 2021
8
October, 2022
6
August, 2017
4
May, 2019
4
November, 2021
3
September, 2023
2
February, 2024
1
March, 2024
1
November, 2019
Available data
407
bed bed3+
75
bed bed9
69
tsv
57
bigWig
6
bigBed bed9
Organism
574
Homo sapiens
Biosample type
419
tissue
87
cell line
58
primary cell
10
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
571
AMP
4
ENCODE
Genome assembly (visualization)
530
hg19
168
GRCh38
BIOSAMPLE
TYPE
575 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
Fine-mapped variants
eQTL
binding sites
gene expression
variant allelic effects
tissue
brain
29
2
16
18
3
2
1
1
1
retina
6
23
3
3
1
1
1
1
1
caudate nucleus
5
2
3
4
1
3
2
1
1
pigmented layer of retina
20
substantia nigra
5
2
3
1
3
3
1
+ See 60 more…
cell line
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
WERI-Rb-1
2
1
1
1
1
2
+ See 12 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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