Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
206
accessible chromatin
127
target gene predictions
73
chromatin state
66
gene expression
61
candidate regulatory elements
41
differential activity
35
eQTL
28
variant allelic effects
14
binding sites
11
Fine-mapped variants
2
caQTL
2
pQTL
2
sQTL
2
variant to gene
Date released
188
September, 2022
February, 2021
72
November, 2021
47
March, 2023
47
May, 2021
42
February, 2024
29
June, 2020
29
November, 2022
26
February, 2023
20
January, 2021
19
August, 2021
18
March, 2020
18
May, 2020
17
September, 2023
16
January, 2020
14
October, 2022
13
February, 2020
10
August, 2017
10
January, 2022
8
October, 2019
7
August, 2018
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2018
2
May, 2024
2
November, 2019
2
September, 2018
1
April, 2019
1
June, 2021
Available data
452
bed bed3+
140
bigWig
106
tsv
62
bed bed9
11
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
1
txt
Organism
670
Homo sapiens
Biosample type
348
primary cell
222
tissue
51
cell line
48
in vitro differentiated cells
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
552
AMP
72
ENCODE
20
T1D
15
KPMP
4
ITG
4
community
3
LungMap
Genome assembly (visualization)
542
hg19
195
GRCh38
2
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
670 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
chromatin state
gene expression
candidate regulatory elements
differential activity
eQTL
variant allelic effects
binding sites
Fine-mapped variants
caQTL
pQTL
sQTL
variant to gene
primary cell
fibroblast
16
4
2
6
1
pericyte cell
10
10
1
1
pancreatic beta cell
8
2
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 60 more…
tissue
islet of Langerhans
6
1
3
5
12
1
1
2
2
2
retina
23
3
3
1
3
1
1
adipose tissue
2
8
6
6
4
1
body of pancreas
5
4
2
4
1
1
3
pigmented layer of retina
20
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
WERI-Rb-1
1
1
1
1
1
GM23248
1
1
1
1
Panc1
2
1
1
8988T
1
1
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
6
6
2
mesenchymal stem cell
1
3
2
2
retinal pigment epithelial cell
6
chondrocyte
5
pancreatic ductal cell
3
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download