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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
205
gene expression
183
candidate regulatory elements
112
accessible chromatin
90
chromatin state
87
target gene predictions
56
differential activity
20
variant allelic effects
13
binding sites
10
histone modifications
7
eQTL
3
Fine-mapped variants
Date released
261
September, 2022
208
February, 2021
140
September, 2023
28
August, 2021
24
February, 2023
24
May, 2020
22
June, 2020
22
November, 2022
17
January, 2020
14
February, 2020
7
November, 2021
6
March, 2020
4
October, 2022
2
February, 2024
2
January, 2022
2
March, 2024
1
April, 2019
1
May, 2019
1
November, 2019
Available data
421
bed bed3+
259
tsv
90
bed bed9
87
txt
74
bigWig
3
bigBed bed9
Organism
786
Homo sapiens
Biosample type
396
tissue
332
primary cell
51
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
639
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
516
hg19
132
GRCh38
BIOSAMPLE
TYPE
786 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
tissue
kidney
7
29
10
16
14
1
1
2
1
right kidney
20
1
10
10
1
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
retina
1
6
23
3
3
1
1
1
1
+ See 20 more…
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
glomerular visceral epithelial cell
5
2
2
1
1
kidney tubule cell
1
3
2
2
2
retinal pigment epithelial cell
2
3
1
1
2
1
+ See 69 more…
cell line
HEK293
3
1
1
1
2
1
WERI-Rb-1
2
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
renal cell carcinoma
1
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