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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
181
candidate regulatory elements
108
accessible chromatin
88
chromatin state
86
target gene predictions
13
binding sites
13
variant allelic effects
10
histone modifications
3
eQTL
Date released
258
September, 2022
114
February, 2021
24
February, 2023
22
November, 2022
20
June, 2020
16
August, 2021
16
January, 2020
16
May, 2020
7
November, 2021
4
October, 2022
2
February, 2024
1
April, 2019
1
February, 2020
1
May, 2019
Available data
413
bed bed3+
88
bed bed9
72
bigWig
2
bigBed bed9
Organism
502
Homo sapiens
Biosample type
363
tissue
84
primary cell
48
cell line
7
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
495
AMP
7
ENCODE
Genome assembly (visualization)
502
hg19
124
GRCh38
BIOSAMPLE
TYPE
502 results
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candidate regulatory elements
accessible chromatin
chromatin state
target gene predictions
binding sites
variant allelic effects
histone modifications
eQTL
tissue
kidney
29
10
16
14
1
1
2
1
right kidney
20
1
10
10
renal cortex interstitium
20
1
9
9
1
renal pelvis
19
2
9
9
1
retina
6
23
3
3
1
1
1
+ See 17 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
2
1
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
2
1
1
1
glomerular endothelial cell
2
1
1
1
1
+ See 19 more…
cell line
HEK293
3
1
1
1
2
1
WERI-Rb-1
2
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
renal cell carcinoma
1
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