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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
292
candidate regulatory elements
223
gene expression
162
target gene predictions
160
chromatin state
151
accessible chromatin
58
histone modifications
56
differential activity
36
Fine-mapped variants
35
eQTL
35
variant allelic effects
29
binding sites
Date released
438
September, 2022
317
February, 2021
143
September, 2023
45
January, 2020
42
June, 2020
41
March, 2020
40
May, 2020
29
February, 2020
28
August, 2021
24
February, 2023
22
November, 2022
20
January, 2022
11
May, 2021
10
October, 2022
7
November, 2021
6
August, 2017
5
May, 2019
4
March, 2024
3
February, 2024
1
April, 2019
1
November, 2019
Available data
722
bed bed3+
321
tsv
154
bed bed9
93
bigWig
87
txt
8
bigBed bed9
Organism
1236
Homo sapiens
Biosample type
730
tissue
367
primary cell
128
cell line
11
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1090
AMP
140
KPMP
7
ENCODE
Genome assembly (visualization)
925
hg19
276
GRCh38
BIOSAMPLE
TYPE
1237 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
histone modifications
differential activity
Fine-mapped variants
eQTL
variant allelic effects
binding sites
tissue
kidney
29
7
14
16
10
2
1
1
1
brain
29
1
16
18
2
3
2
1
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 81 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
retinal pigment epithelial cell
2
1
1
3
1
2
+ See 78 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
HEK293
3
1
1
1
1
2
SK-N-MC
2
1
1
1
1
2
+ See 24 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
renal cell carcinoma
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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