Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
41
candidate regulatory elements
21
target gene predictions
20
binding sites
19
chromatin state
10
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Date released
54
September, 2022
49
February, 2021
24
February, 2023
22
November, 2022
14
June, 2020
5
November, 2021
4
October, 2022
3
May, 2020
2
February, 2020
2
January, 2020
2
January, 2021
1
February, 2024
1
May, 2021
1
May, 2022
Available data
163
bed bed3+
38
bigWig
18
bed bed9
2
tsv
1
bed bed9+
Organism
184
Homo sapiens
Biosample type
72
cell line
70
tissue
36
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
177
AMP
5
ENCODE
2
T1D
Genome assembly (visualization)
182
hg19
26
GRCh38
BIOSAMPLE
TYPE
184 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
gene expression
cell line
GM12864
1
2
1
2
1
1
GM12865
1
2
1
2
1
1
MM.1S
1
2
2
1
1
1
WERI-Rb-1
1
2
1
2
1
1
GM10248
1
2
1
1
1
+ See 13 more…
tissue
retina
23
6
3
1
3
1
1
1
1
pigmented layer of retina
20
eye
1
4
2
2
corneal epithelium
1
primary cell
retinal pigment epithelial cell
3
2
1
2
1
1
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
megakaryocyte
2
2
stromal cell of bone marrow
2
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
See all biosamples
Download