Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
137
candidate regulatory elements
102
accessible chromatin
89
target gene predictions
85
chromatin state
52
histone modifications
36
Fine-mapped variants
22
binding sites
12
eQTL
12
variant allelic effects
Date released
219
September, 2022
130
February, 2021
38
March, 2020
28
June, 2020
24
February, 2023
22
November, 2022
21
January, 2020
14
May, 2020
12
February, 2020
11
May, 2021
8
October, 2022
6
August, 2017
4
May, 2019
4
November, 2021
3
September, 2023
1
February, 2024
1
January, 2022
1
November, 2019
Available data
420
bed bed3+
79
bed bed9
57
bigWig
48
tsv
6
bigBed bed9
Organism
546
Homo sapiens
Biosample type
384
tissue
91
cell line
62
primary cell
9
in vitro differentiated cells
1
stem cell
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
543
AMP
4
ENCODE
Genome assembly (visualization)
547
hg19
173
GRCh38
BIOSAMPLE
TYPE
547 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
Fine-mapped variants
binding sites
eQTL
variant allelic effects
tissue
brain
29
2
16
18
3
1
1
retina
6
23
3
3
1
1
1
pigmented layer of retina
20
caudate nucleus
5
2
3
4
1
3
1
layer of hippocampus
6
3
4
1
1
+ See 58 more…
cell line
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
WERI-Rb-1
2
1
1
1
1
2
+ See 13 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download