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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
156
candidate regulatory elements
110
accessible chromatin
105
target gene predictions
95
chromatin state
53
histone modifications
44
eQTL
42
Fine-mapped variants
34
gene expression
24
binding sites
22
variant allelic effects
2
differential activity
Date released
243
September, 2022
154
February, 2021
47
March, 2020
35
January, 2020
29
June, 2020
25
February, 2020
24
February, 2023
24
May, 2020
23
November, 2022
22
January, 2022
15
May, 2021
8
August, 2017
8
October, 2022
6
August, 2021
6
November, 2021
4
February, 2024
4
May, 2019
3
September, 2023
2
March, 2024
2
September, 2018
1
January, 2018
1
November, 2019
Available data
473
bed bed3+
92
tsv
87
bed bed9
63
bigWig
7
bigBed bed9
Organism
686
Homo sapiens
Biosample type
524
tissue
90
cell line
61
primary cell
11
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
681
AMP
6
ENCODE
Genome assembly (visualization)
620
hg19
198
GRCh38
2
hg18
BIOSAMPLE
TYPE
687 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
eQTL
Fine-mapped variants
gene expression
binding sites
variant allelic effects
differential activity
tissue
brain
29
2
16
18
3
2
1
1
1
retina
6
23
3
3
1
1
1
1
1
adipose tissue
7
2
8
6
4
3
1
1
caudate nucleus
5
2
3
4
1
2
3
1
1
ovary
8
1
6
4
1
1
+ See 69 more…
cell line
SK-N-DZ
4
1
2
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
WERI-Rb-1
2
1
1
1
1
2
+ See 14 more…
primary cell
retinal pigment epithelial cell
2
3
1
1
1
2
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
white adipose cell
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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