Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
93
candidate regulatory elements
75
accessible chromatin
54
target gene predictions
44
chromatin state
24
binding sites
17
histone modifications
6
gene expression
4
eQTL
3
variant allelic effects
2
differential activity
Date released
129
September, 2022
85
February, 2021
24
February, 2023
22
November, 2022
17
November, 2021
14
June, 2020
6
October, 2022
5
May, 2021
5
September, 2023
3
January, 2022
2
February, 2020
2
February, 2024
2
January, 2020
2
March, 2024
2
May, 2020
1
April, 2020
1
August, 2017
Available data
267
bed bed3+
44
bigWig
43
bed bed9
9
tsv
Organism
322
Homo sapiens
Biosample type
132
primary cell
95
tissue
80
cell line
15
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
299
AMP
17
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
310
hg19
66
GRCh38
BIOSAMPLE
TYPE
322 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
2
5
3
1
2
1
foreskin fibroblast
6
1
2
1
4
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
6
2
2
+ See 16 more…
tissue
retina
6
23
3
3
1
1
1
1
1
pigmented layer of retina
20
lower leg skin
6
2
2
eye
4
1
2
2
skin of body
1
1
1
3
+ See 6 more…
cell line
WERI-Rb-1
2
1
1
1
2
1
GM23248
2
1
1
1
1
1
RPMI7951
2
1
1
1
SK-MEL-5
2
1
1
1
iPS DF 19.11
2
2
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download