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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
candidate regulatory elements
90
target gene predictions
82
accessible chromatin
74
chromatin state
13
binding sites
12
histone modifications
5
eQTL
5
gene expression
5
variant allelic effects
Date released
209
September, 2022
98
February, 2021
24
February, 2023
23
November, 2021
22
November, 2022
17
June, 2020
7
February, 2024
7
May, 2021
4
August, 2017
4
January, 2022
4
March, 2024
3
March, 2020
3
October, 2022
2
February, 2020
2
January, 2020
2
May, 2020
1
November, 2019
Available data
352
bed bed3+
70
bed bed9
48
bigWig
6
tsv
Organism
432
Homo sapiens
Biosample type
336
tissue
46
primary cell
44
cell line
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
409
AMP
23
ENCODE
Genome assembly (visualization)
422
hg19
103
GRCh38
BIOSAMPLE
TYPE
432 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
retina
6
3
23
3
1
1
1
1
1
spleen
15
8
2
6
1
1
1
sigmoid colon
10
7
1
5
+ See 20 more…
primary cell
retinal pigment epithelial cell
2
1
3
1
2
1
colon epithelial cell
3
3
enterocyte
3
3
iris pigment epithelial cell
2
1
1
1
enteric smooth muscle cell
2
2
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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