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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
140
candidate regulatory elements
140
target gene predictions
83
accessible chromatin
72
chromatin state
16
binding sites
14
histone modifications
6
gene expression
5
eQTL
5
variant allelic effects
Date released
203
September, 2022
98
February, 2021
58
February, 2024
25
November, 2021
24
February, 2023
22
November, 2022
18
June, 2020
8
May, 2021
5
March, 2024
4
August, 2017
4
January, 2022
4
October, 2022
2
February, 2020
2
January, 2020
2
March, 2020
2
May, 2020
Available data
402
bed bed3+
68
bed bed9
48
bigWig
7
tsv
Organism
481
Homo sapiens
Biosample type
315
tissue
109
cell line
51
primary cell
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
456
AMP
25
ENCODE
Genome assembly (visualization)
470
hg19
153
GRCh38
BIOSAMPLE
TYPE
481 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
retina
6
3
23
3
1
1
1
1
1
sigmoid colon
10
7
1
5
pigmented layer of retina
20
+ See 23 more…
cell line
HeLa-S3
5
55
3
1
HT-29
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 8 more…
primary cell
retinal pigment epithelial cell
2
1
3
1
2
1
colon epithelial cell
3
3
enterocyte
3
3
iris pigment epithelial cell
2
1
1
1
enteric smooth muscle cell
2
2
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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