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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
target gene predictions
86
accessible chromatin
50
candidate regulatory elements
30
chromatin state
27
gene expression
23
binding sites
20
histone modifications
10
eQTL
6
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
85
September, 2022
81
February, 2024
53
February, 2021
24
February, 2023
22
November, 2022
13
June, 2020
11
November, 2021
10
August, 2021
10
March, 2020
5
January, 2020
5
May, 2020
5
May, 2021
4
February, 2020
4
March, 2023
4
October, 2022
3
August, 2017
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
275
bed bed3+
60
bigWig
32
tsv
27
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
348
Homo sapiens
Biosample type
141
tissue
103
cell line
91
primary cell
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
337
AMP
11
ENCODE
Genome assembly (visualization)
311
hg19
134
GRCh38
2
hg18
BIOSAMPLE
TYPE
348 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
liver
10
4
13
9
1
1
2
7
1
1
retina
3
23
6
3
1
1
1
1
1
pigmented layer of retina
20
eye
2
1
4
2
right lobe of liver
1
2
1
1
1
3
+ See 5 more…
cell line
HeLa-S3
55
5
3
1
HepG2
3
2
2
2
3
5
WERI-Rb-1
1
1
2
1
2
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
+ See 4 more…
primary cell
hepatocyte
3
8
1
1
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
retinal pigment epithelial cell
1
3
2
1
2
1
hepatic stellate cell
1
3
1
1
1
1
1
iris pigment epithelial cell
1
1
2
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
See all biosamples
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