Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
138
accessible chromatin
117
candidate regulatory elements
92
differential activity
83
target gene predictions
61
chromatin state
46
binding sites
41
variant allelic effects
29
histone modifications
6
eQTL
2
caQTL
Date released
29
June, 2020
26
February, 2024
15
November, 2022
12
January, 2020
10
February, 2023
10
January, 2021
8
August, 2021
7
April, 2020
7
May, 2021
5
October, 2019
5
September, 2022
2
May, 2022
1
May, 2020
1
November, 2019
Available data
135
bed bed3+
82
bigWig
7
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
138
Homo sapiens
Biosample type
82
primary cell
34
tissue
13
cell line
9
in vitro differentiated cells
Organ
134
epithelium
56
connective tissue
55
eye
54
pancreas
47
kidney
42
brain
31
vasculature
23
blood vessel
20
heart
20
limb
20
liver
19
musculature of body
14
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
9
lung
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
121
AMP
ENCODE
10
T1D
7
LungMap
Genome assembly (visualization)
137
hg19
37
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
138 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
hepatocyte
7
pancreatic beta cell
6
endothelial cell
5
pancreatic alpha cell
5
endothelial cell of hepatic sinusoid
4
+ See 37 more…
tissue
pigmented layer of retina
20
pancreatic ductal cell
2
breast epithelium
1
endothelial cell
1
esophagus squamous epithelium
1
+ See 9 more…
cell line
EndoC_BH1
8
NT2-D1 cell
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
glomerular visceral epithelial cell
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
dermis microvascular lymphatic vessel endothelial cell
1
foreskin keratinocyte
1
mammary gland epithelial cell
1
See all biosamples
Download