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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
candidate regulatory elements
219
gene expression
143
target gene predictions
130
chromatin state
75
accessible chromatin
58
differential activity
30
binding sites
23
eQTL
21
histone modifications
20
variant allelic effects
6
Fine-mapped variants
Date released
375
September, 2022
291
February, 2021
140
September, 2023
34
August, 2021
28
June, 2020
22
May, 2020
18
January, 2020
15
November, 2021
14
February, 2020
12
March, 2020
10
January, 2022
9
May, 2021
7
October, 2022
6
March, 2024
4
February, 2024
3
August, 2017
2
September, 2018
1
April, 2019
1
January, 2018
1
May, 2019
1
November, 2022
Available data
560
bed bed3+
277
tsv
127
bed bed9
87
txt
47
bigWig
3
bigBed bed9
Organism
995
Homo sapiens
Biosample type
449
tissue
414
primary cell
121
cell line
11
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
840
AMP
140
KPMP
15
ENCODE
Genome assembly (visualization)
700
hg19
188
GRCh38
2
hg18
BIOSAMPLE
TYPE
995 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
tissue
kidney
29
7
14
16
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 32 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
2
1
2
1
foreskin fibroblast
6
2
1
1
4
2
+ See 80 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 31 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
renal cell carcinoma
1
skin fibroblast
1
+ See 1 more…
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