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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
153
target gene predictions
83
candidate regulatory elements
40
chromatin state
20
accessible chromatin
20
binding sites
14
gene expression
14
histone modifications
4
eQTL
Date released
117
September, 2022
102
February, 2024
75
February, 2021
16
June, 2020
10
May, 2021
8
August, 2021
6
November, 2021
4
January, 2022
4
March, 2024
3
October, 2022
2
March, 2020
1
August, 2017
Available data
291
bed bed3+
39
bed bed9
14
tsv
4
bigWig
Organism
348
Homo sapiens
Biosample type
199
cell line
87
tissue
31
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
342
AMP
6
ENCODE
Genome assembly (visualization)
330
hg19
151
GRCh38
BIOSAMPLE
TYPE
348 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
cell line
HeLa-S3
55
5
3
1
H1-hESC
39
1
1
1
2
8
1
H9
8
7
1
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 18 more…
tissue
ovary
6
8
4
1
1
1
testis
3
7
3
1
1
1
1
1
chorionic villus
4
8
4
trophoblast
3
4
2
1
1
uterus
2
3
1
1
1
1
+ See 7 more…
primary cell
trophoblast cell
5
7
4
1
1
Ishikawa
1
1
1
luteal cell
1
1
primordial germ cell
1
1
uterine smooth muscle cell
1
1
+ See 4 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
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