Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
262
gene expression
217
accessible chromatin
139
candidate regulatory elements
139
target gene predictions
93
differential activity
79
chromatin state
50
binding sites
47
variant allelic effects
32
histone modifications
12
eQTL
9
Fine-mapped variants
5
caQTL
Date released
227
February, 2021
211
September, 2022
155
September, 2023
129
November, 2021
77
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
24
August, 2021
22
May, 2020
21
January, 2020
18
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
8
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
6
January, 2022
5
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
May, 2019
Available data
628
bed bed3+
345
tsv
176
bigWig
78
txt
76
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1084
Homo sapiens
Biosample type
820
primary cell
184
tissue
54
cell line
26
in vitro differentiated cells
Organ
929
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
257
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
791
AMP
155
KPMP
129
ENCODE
T1D
7
LungMap
2
community
Genome assembly (visualization)
716
hg19
291
GRCh38
award.project!
T1D
BIOSAMPLE
TYPE
1084 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
14
6
2
2
1
1
2
hepatocyte
13
8
1
3
1
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 153 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
ovary
1
1
8
6
4
1
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
testis
1
1
7
3
3
1
1
1
+ See 26 more…
cell line
EndoC_BH1
8
8
1
3
1
NT2-D1 cell
1
1
1
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
Download