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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
candidate regulatory elements
81
target gene predictions
75
chromatin state
49
accessible chromatin
31
gene expression
18
binding sites
17
histone modifications
16
eQTL
12
Fine-mapped variants
12
variant allelic effects
4
differential activity
1
caQTL
Date released
208
September, 2022
96
February, 2021
29
February, 2024
20
March, 2020
15
June, 2020
13
May, 2020
10
August, 2021
10
January, 2020
8
February, 2020
7
May, 2021
7
November, 2021
6
January, 2022
4
March, 2023
3
August, 2017
3
March, 2024
3
November, 2019
2
May, 2019
2
May, 2022
2
October, 2022
1
July, 2020
1
September, 2018
Available data
313
bed bed3+
72
bed bed9
47
tsv
38
bigWig
5
bigBed bed9
3
csv
1
bam
Organism
450
Homo sapiens
Biosample type
333
tissue
68
primary cell
42
cell line
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
443
AMP
7
ENCODE
Genome assembly (visualization)
406
hg19
151
GRCh38
2
hg18
BIOSAMPLE
TYPE
450 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
tissue
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
liver
13
10
9
4
1
1
2
7
1
1
tibial nerve
6
3
4
3
2
2
3
2
ovary
8
6
4
1
1
1
+ See 22 more…
primary cell
hepatocyte
1
3
1
8
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
pancreatic endothelial cell
1
3
luteal cell
1
1
+ See 4 more…
cell line
HepG2
2
3
2
2
3
5
GM23248
2
1
1
1
1
1
HuH-7
1
1
1
1
1
1
NT2-D1 cell
1
1
1
1
2
HuH-7.5
1
1
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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