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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
154
candidate regulatory elements
128
target gene predictions
91
accessible chromatin
84
chromatin state
53
gene expression
33
differential activity
21
eQTL
15
histone modifications
14
binding sites
14
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
232
September, 2022
114
February, 2021
47
March, 2023
40
May, 2021
39
November, 2021
31
February, 2024
20
January, 2021
18
June, 2020
12
March, 2020
10
January, 2022
8
August, 2021
7
August, 2017
7
August, 2018
6
May, 2020
6
October, 2019
5
March, 2024
4
January, 2020
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
424
bed bed3+
81
tsv
76
bed bed9
69
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
616
Homo sapiens
Biosample type
385
tissue
153
primary cell
75
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
555
AMP
39
ENCODE
20
T1D
2
community
Genome assembly (visualization)
514
hg19
153
GRCh38
BIOSAMPLE
TYPE
616 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
1
2
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 28 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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