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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
154
candidate regulatory elements
128
target gene predictions
91
accessible chromatin
84
chromatin state
52
gene expression
33
differential activity
20
eQTL
15
histone modifications
14
binding sites
14
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
232
September, 2022
114
February, 2021
47
March, 2023
40
May, 2021
39
November, 2021
31
February, 2024
20
January, 2021
18
June, 2020
12
March, 2020
10
January, 2022
8
August, 2021
7
August, 2017
7
August, 2018
6
May, 2020
6
October, 2019
5
March, 2024
4
January, 2020
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
424
bed bed3+
79
tsv
76
bed bed9
69
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
614
Homo sapiens
Biosample type
383
tissue
153
primary cell
75
cell line
3
in vitro differentiated cells
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
553
AMP
39
ENCODE
20
T1D
2
community
Genome assembly (visualization)
513
hg19
152
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
614 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
13
1
2
1
2
2
2
sigmoid colon
10
7
1
5
body of pancreas
8
5
4
1
1
3
+ See 28 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 22 more…
cell line
EndoC_BH1
1
8
8
3
1
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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