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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
154
candidate regulatory elements
114
target gene predictions
84
chromatin state
83
accessible chromatin
35
gene expression
33
differential activity
21
eQTL
15
histone modifications
14
binding sites
14
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
232
September, 2022
114
February, 2021
47
March, 2023
May, 2021
39
November, 2021
31
February, 2024
20
January, 2021
18
June, 2020
12
March, 2020
10
January, 2022
8
August, 2021
7
August, 2017
7
August, 2018
6
May, 2020
6
October, 2019
5
March, 2024
4
January, 2020
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
402
bed bed3+
76
bed bed9
69
bigWig
65
tsv
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
576
Homo sapiens
Biosample type
375
tissue
141
primary cell
57
cell line
3
in vitro differentiated cells
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
515
AMP
39
ENCODE
20
T1D
2
community
Genome assembly (visualization)
492
hg19
153
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
576 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
histone modifications
binding sites
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
16
15
1
1
large intestine
27
13
13
1
1
islet of Langerhans
1
3
5
9
13
1
2
1
2
2
2
body of pancreas
8
4
4
2
1
1
3
sigmoid colon
10
6
5
1
+ See 28 more…
primary cell
pancreatic beta cell
3
8
2
3
1
pancreatic ductal cell
2
6
2
3
2
1
1
pancreatic alpha cell
3
7
2
3
1
pancreatic delta cell
4
5
2
3
1
pancreatic acinar cell
2
6
2
3
1
+ See 20 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
EndoC_BH1
1
1
3
1
HCT116
2
3
1
NT2-D1 cell
1
1
1
1
2
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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