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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
gene expression
49
accessible chromatin
45
candidate regulatory elements
39
target gene predictions
31
differential activity
27
chromatin state
18
eQTL
11
variant allelic effects
8
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
74
September, 2022
45
February, 2021
45
March, 2023
34
May, 2021
25
February, 2024
10
March, 2020
9
June, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
3
March, 2024
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
163
bed bed3+
79
tsv
36
bigWig
23
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
295
Homo sapiens
Biosample type
163
tissue
90
primary cell
39
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
295
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
200
hg19
56
GRCh38
BIOSAMPLE
TYPE
295 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
2
1
2
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
ovary
1
1
8
6
4
1
testis
1
1
7
3
3
1
1
1
+ See 10 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
1
2
pancreatic beta cell
3
4
1
3
1
pancreatic alpha cell
3
3
1
3
1
pancreatic acinar cell
3
2
1
3
1
pancreatic delta cell
3
2
1
3
1
+ See 13 more…
cell line
EndoC_BH1
8
8
1
1
1
NT2-D1 cell
1
1
1
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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