Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
64
candidate regulatory elements
38
chromatin state
38
target gene predictions
37
accessible chromatin
34
gene expression
22
binding sites
18
differential activity
13
variant allelic effects
8
histone modifications
7
eQTL
6
Fine-mapped variants
1
caQTL
Date released
93
September, 2022
55
February, 2021
35
September, 2023
17
February, 2024
14
January, 2020
13
May, 2020
10
June, 2020
10
March, 2020
8
November, 2021
5
January, 2022
5
October, 2022
4
March, 2023
3
April, 2020
3
March, 2024
2
February, 2020
2
May, 2021
2
November, 2019
2
October, 2019
1
August, 2017
1
August, 2021
1
February, 2023
Available data
182
bed bed3+
60
tsv
37
bed bed9
27
bigWig
7
bigBed bed9
2
txt
Organism
286
Homo sapiens
Biosample type
168
primary cell
102
tissue
14
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
240
AMP
35
KPMP
8
ENCODE
3
LungMap
Genome assembly (visualization)
226
hg19
86
GRCh38
organ_slims!
breast
heart
BIOSAMPLE
TYPE
286 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell of umbilical vein
6
5
4
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 28 more…
tissue
ovary
8
4
6
1
1
1
tibial artery
3
3
2
3
1
2
2
3
testis
7
3
3
1
1
1
1
1
ascending aorta
4
3
2
1
1
1
1
3
aorta
4
4
4
1
+ See 5 more…
cell line
NT2-D1 cell
1
1
1
1
2
choroid plexus epithelial cell
1
1
1
dermis lymphatic vessel endothelial cell
1
1
vein endothelial cell
1
1
NT2/D1
1
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download