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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
270
gene expression
200
accessible chromatin
150
target gene predictions
141
candidate regulatory elements
97
differential activity
80
chromatin state
52
variant allelic effects
51
binding sites
32
histone modifications
12
eQTL
9
Fine-mapped variants
5
caQTL
Date released
230
February, 2021
214
September, 2022
165
September, 2023
129
November, 2021
79
February, 2024
38
March, 2023
37
May, 2021
June, 2020
25
January, 2020
25
May, 2020
24
August, 2021
20
January, 2021
18
March, 2020
16
February, 2023
15
November, 2022
13
February, 2020
9
October, 2022
7
April, 2020
7
October, 2019
6
August, 2018
6
January, 2022
5
March, 2024
4
November, 2019
3
August, 2017
2
May, 2022
1
July, 2020
1
May, 2019
Available data
631
bed bed3+
357
tsv
190
bigWig
80
txt
77
bed bed9
14
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1099
Homo sapiens
Biosample type
849
primary cell
177
tissue
50
cell line
23
in vitro differentiated cells
Organ
924
epithelium
637
kidney
445
brain
440
connective tissue
369
musculature of body
305
lung
279
intestine
273
pancreas
260
vasculature
250
heart
238
limb
206
bodily fluid
205
embryo
200
blood vessel
196
skin of body
195
blood
167
large intestine
151
liver
140
extraembryonic component
116
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
81
uterus
73
prostate gland
72
adrenal gland
72
artery
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
46
gonad
43
esophagus
41
spinal cord
33
spleen
24
nerve
24
testis
22
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
13
bone marrow
13
pituitary gland
12
breast
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
776
AMP
165
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
720
hg19
296
GRCh38
month_released!
June, 2020
BIOSAMPLE
TYPE
1099 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
7
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
1
1
2
1
1
endothelial cell of umbilical vein
1
4
6
5
1
2
+ See 158 more…
tissue
coronary artery
1
3
3
3
3
2
2
3
1
ovary
1
6
8
4
1
pigmented layer of retina
20
tibial artery
1
2
2
3
3
2
2
3
testis
1
3
7
3
1
1
1
+ See 24 more…
cell line
EndoC_BH1
8
8
1
3
1
NT2-D1 cell
1
1
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
colon epithelial cell
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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