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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
195
candidate regulatory elements
119
target gene predictions
111
chromatin state
56
accessible chromatin
39
gene expression
33
binding sites
18
differential activity
16
variant allelic effects
13
histone modifications
10
eQTL
9
Fine-mapped variants
3
caQTL
Date released
306
September, 2022
129
February, 2021
35
September, 2023
18
February, 2024
17
November, 2021
16
January, 2020
16
June, 2020
15
May, 2020
14
March, 2020
9
October, 2022
8
May, 2021
7
January, 2022
6
April, 2020
5
February, 2020
4
February, 2023
4
March, 2023
4
March, 2024
3
November, 2019
2
August, 2017
2
October, 2019
1
August, 2021
1
May, 2019
Available data
435
bed bed3+
109
bed bed9
67
tsv
41
bigWig
8
bigBed bed9
2
txt
Organism
622
Homo sapiens
Biosample type
304
tissue
202
primary cell
114
cell line
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
564
AMP
35
KPMP
17
ENCODE
6
LungMap
Genome assembly (visualization)
553
hg19
179
GRCh38
BIOSAMPLE
TYPE
622 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
coronary artery
3
3
3
3
1
2
2
3
1
ovary
8
6
4
1
1
1
+ See 10 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
fibroblast of lung
6
4
4
2
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
+ See 35 more…
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
NT2-D1 cell
1
1
1
1
2
+ See 9 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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