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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
93
target gene predictions
91
accessible chromatin
69
gene expression
68
chromatin state
33
differential activity
21
eQTL
21
variant allelic effects
14
Fine-mapped variants
12
histone modifications
10
binding sites
2
caQTL
2
sQTL
2
variant to gene
Date released
103
September, 2022
47
March, 2023
37
May, 2021
34
February, 2021
30
February, 2024
28
November, 2021
24
March, 2020
20
January, 2021
17
May, 2020
16
August, 2021
16
January, 2020
13
February, 2020
9
June, 2020
8
October, 2019
7
April, 2019
7
August, 2018
7
January, 2022
5
November, 2019
4
February, 2023
3
August, 2017
1
January, 2018
1
June, 2021
1
May, 2019
Available data
238
bed bed3+
105
tsv
79
bigWig
59
bed bed9
14
bigBed narrowPeak
12
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
438
Homo sapiens
Biosample type
244
tissue
151
primary cell
39
cell line
4
in vitro differentiated cells
Organ
849
epithelium
493
kidney
378
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
388
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
321
hg19
154
GRCh38
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
438 results
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Clear Filters
target gene predictions
accessible chromatin
gene expression
chromatin state
differential activity
eQTL
variant allelic effects
Fine-mapped variants
histone modifications
binding sites
caQTL
sQTL
variant to gene
tissue
heart
20
5
3
21
2
1
1
islet of Langerhans
1
6
11
3
13
1
2
1
2
2
2
heart left ventricle
7
3
1
8
1
2
1
coronary artery
3
3
1
3
2
2
3
1
pancreas
5
5
3
1
1
1
1
+ See 20 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
3
1
fibroblast of cardiac tissue
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
Panc1
2
1
8988T
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
cardiac fibroblast
1
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